The Application of Micro-Raman Spectroscopy to Analysis and Identification of Minerals in Thin Section

Micro-Raman spectroscopy is a useful analytical tool for studying minerals in thin section. The advantages of this technique as a structural probe for analysis of micron-size minerals are demonstrated with a study of polymorphism of SiO2 and MgSiO3. Three polymorphs of silica, -quartz, coesite, and glass, in a thin section of Coconino sandstone were identified in situ with a Raman microprobe. The Raman spectra of these phases were compared to that measured for stishovite obtained from the same rock. Spectra of protoenstatite, orthoenstatite, and clinoenstatite, three polymorphs of MgSiO3, are consistent with their similar pyroxene chain structures but different space groups. The characteristic Raman spectra in each instance could be used for finger-printing identification of the phases and their orientations

Kinematics of the X-shaped Milky Way Bulge: Expectations from a Self-consistent N-body Model

We explore the kinematics (both the radial velocity and the proper motion) of the vertical X-shaped feature in the Milky Way with an N-body bar/bulge model. From the solar perspective, the distance distribution of particles is double-peaked in fields passing through the X-shape. The separation and amplitude ratio between the two peaks qualitatively match the observed trends towards the Galactic bulge. We confirm clear signatures of cylindrical rotation in the pattern of mean radial velocity across the bar/bulge region. We also find possible imprints of coherent orbital motion inside the bar structure in the radial velocity distribution along l=0 degree, where the near and far sides of the bar/bulge show excesses of approaching and receding particles. The coherent orbital motion is also reflected in the slight displacement of the zero-velocity-line in the mean radial velocity, and the displacement of the maximum/minimum in the mean longitudinal proper motion across the bulge region. We find some degree of anisotropy in the stellar velocity within the X-shape, but the underlying orbital family of the X-shape cannot be clearly distinguished. Two potential applications of the X-shape in previous literature are tested, i.e., bulge rotation and Galactic center measurements. We find that the proper motion difference between the two sides of the X-shape can be used to estimate the mean azimuthal streaming motion of the bulge, but not the pattern speed of the bar. We also demonstrate that the Galactic center can be located with the X-shape, but the accuracy depends on the fitting scheme, the number of fields, and their latitudinal coverage.Comment: Minor changes to match the ApJ accepted version; 17 pages; emulateapj format. The electronic tables of our model result are available upon reques

Are latent working memory items retrieved from long-term memory?

Switching one’s focus of attention between to-be-remembered items in working memory (WM) is critical for cognition, but the mechanisms by which this is accomplished are unclear. A long-term memory (LTM) account suggests that switching attention away from an item, and passively retaining and reactivating such “latent” items back into the focus of attention involves episodic LTM retrieval processes, even for delays of only a few seconds. We tested this hypothesis using a two-item, double-retrocue WM task that requires participants to switch attention away from and reactivate items followed by subsequent LTM tests for reactivated items from the initial WM task (vs. continuously retained or untested control items). We compared performance on these tests between older adults (a population with LTM deficits) and young adults with either full (Experiment 1) or divided (Experiment 2) attention during the WM delay periods. The effects of reactivating latent items, as well as ageing and divided attention, had significant effects on WM performance, but did not interact with or systematically affect subsequent LTM for reactivated versus control items on item-, location-, or associative-recognition memory judgements made with either high or low confidence. Experiment 3 confirmed that these effects did not depend on whether or not young participants were warned about the subsequent LTM tests before performing the WM task. These dissociations between WM and LTM are inconsistent with the LTM account of latent WM; they are more consistent with the dynamic processing model of WM (Current Directions in Psychological Science)

Mutator Dynamics on a Smooth Evolutionary Landscape

We investigate a model of evolutionary dynamics on a smooth landscape which features a ``mutator'' allele whose effect is to increase the mutation rate. We show that the expected proportion of mutators far from equilibrium, when the fitness is steadily increasing in time, is governed solely by the transition rates into and out of the mutator state. This results is a much faster rate of fitness increase than would be the case without the mutator allele. Near the fitness equilibrium, however, the mutators are severely suppressed, due to the detrimental effects of a large mutation rate near the fitness maximum. We discuss the results of a recent experiment on natural selection of E. coli in the light of our model.Comment: 4 pages, 3 figure

An RLL-Constrained LDPC Coded Recording System Using Deliberate Flipping and Flipped-Bit Detection

International audienceIn this paper, a low-density parity-check (LDPC) coded recording system is investigated, for which the run-length-limited (RLL) constraint is satisfied by deliberate flipping at the write side and by estimating the flipped bits at the read side. Two approaches are proposed for enhancing the error performance of such a system. The first approach is to alleviate the negative effect of incorrect estimation of the flipped bits by adjusting the soft information. The second approach is to increase the likelihood of the correct detection of flipped bits by designing a flipped-bit detection algorithm that utilizes both the RLL constraint and the parity-check constraint of the LDPC code. These two approaches can be combined to obtain significant improvement in performance over previously proposed methods

Robust estimation of microbial diversity in theory and in practice

Quantifying diversity is of central importance for the study of structure, function and evolution of microbial communities. The estimation of microbial diversity has received renewed attention with the advent of large-scale metagenomic studies. Here, we consider what the diversity observed in a sample tells us about the diversity of the community being sampled. First, we argue that one cannot reliably estimate the absolute and relative number of microbial species present in a community without making unsupported assumptions about species abundance distributions. The reason for this is that sample data do not contain information about the number of rare species in the tail of species abundance distributions. We illustrate the difficulty in comparing species richness estimates by applying Chao's estimator of species richness to a set of in silico communities: they are ranked incorrectly in the presence of large numbers of rare species. Next, we extend our analysis to a general family of diversity metrics ("Hill diversities"), and construct lower and upper estimates of diversity values consistent with the sample data. The theory generalizes Chao's estimator, which we retrieve as the lower estimate of species richness. We show that Shannon and Simpson diversity can be robustly estimated for the in silico communities. We analyze nine metagenomic data sets from a wide range of environments, and show that our findings are relevant for empirically-sampled communities. Hence, we recommend the use of Shannon and Simpson diversity rather than species richness in efforts to quantify and compare microbial diversity.Comment: To be published in The ISME Journal. Main text: 16 pages, 5 figures. Supplement: 16 pages, 4 figure

Overwhelming postsplenectomy infection due to Mycoplasma pneumoniae in an asplenic cirrhotic patient: Case report

<p>Abstract</p> <p>Background</p> <p><it>Mycoplasma </it><it>pneumoniae </it>infection is usually self-limited, but some fulminant cases are fatal, even when occurring in previously healthy individuals. It can also be the cause of overwhelming postsplenectomy infection (OPSI).</p> <p>Case presentation</p> <p>We report a case of OPSI in a 41-year-old woman with hypersplenism associated with hepatitis B cirrhosis. We detected a significant <it>Mycoplasma pneumoniae </it>agglutination titer, but no evidence of infection with <it>Chlamydia pneumoniae, Legionnella spp</it>., or any other bacterial or fungal pathogens. She eventually died despite aggressive therapy.</p> <p>Conclusions</p> <p><it>M. pneumoniae </it>could be an underestimated cause of OPSI, and should be suspected in fulminant infectious cases in asplenic patients.</p

Physics at BES-III

This physics book provides detailed discussions on important topics in $\tau$-charm physics that will be explored during the next few years at \bes3 . Both theoretical and experimental issues are covered, including extensive reviews of recent theoretical developments and experimental techniques. Among the subjects covered are: innovations in Partial Wave Analysis (PWA), theoretical and experimental techniques for Dalitz-plot analyses, analysis tools to extract absolute branching fractions and measurements of decay constants, form factors, and CP-violation and \DzDzb-oscillation parameters. Programs of QCD studies and near-threshold tau-lepton physics measurements are also discussed.Comment: Edited by Kuang-Ta Chao and Yi-Fang Wan

Mini percutaneous nephrolithotomy is a noninferior modality to standard percutaneous nephrolithotomy for the management of 20-40 mm renal calculi: A Multicenter randomized controlled trial

Background: High quality of evidence comparing mini percutaneous nephrolithotomy (mPNL) with standard percutaneous nephrolithotomy (sPNL) for the treatment of larger-sized renal stones is lacking. Objective: To compare the efficacy and safety of mPNL and sPNL for the treatment of 20–40 mm renal stones. Design, setting, and participants: A parallel, open-label, and noninferior randomized controlled trial was performed at 20 Chinese centers (2016–2019). The inclusion criteria were patients 18–70 yr old, with normal renal function, and 20–40 mm renal stones. Intervention: Percutaneous nephrolithotomy PNL was performed using either 18 F or 24 F percutaneous nephrostomy tracts. Outcome measurements and statistical analysis: The primary outcome was the one-session stone-free rate (SFR). The secondary outcomes included operating time, visual analog pain scale (VAS) score, blood loss, complications as per the Clavien-Dindo grading system, and length of hospitalization. Results and limitations: The 1980 intention-to-treat patients were randomized. The mPNL group achieved a noninferior one-session SFR to the sPNL group by the one-side noninferiority test (0.5% [difference], p < 0.001). The transfusion and embolization rates were comparable; however, the sPNL group had a higher hemoglobin drop (5.2 g/l, p < 0.001). The sPNL yielded shorter operating time (–2.2 min, p = 0.008) but a higher VAS score (0.8, p < 0.001). Patients in the sPNL group also had longer hospitalization (0.6 d, p < 0.001). There was no statistically significant difference in fever or urosepsis occurrences. The study's main limitation was that only 18F or 24F tract sizes were used. Conclusions: Mini mPNL achieves noninferior SFR outcomes to sPNL, but with reduced bleeding, less postoperative pain, and shorter hospitalization. Patient summary: We evaluated the surgical outcomes of percutaneous nephrolithotomy using two different sizes of nephrostomy tracts in a large population. We found that the smaller tract might be a sensible alternative for patients with 20–40 mm renal stones. This multicenter, parallel, open-label, and noninferior randomized controlled trial showed that mini percutaneous nephrolithotomy achieved noninferior stone-free rate with advantages of reduced blood loss, less postoperative pain, and shorter hospitalization. Mini percutaneous nephrolithotomy should be considered a sensible alternative treatment of 20–40 mm renal stones.grants from high-level development funding of Guangzhou Medical Universit